STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DZA65_03883Unannotated protein. (155 aa)    
Predicted Functional Partners:
nifK_1
Unannotated protein; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.964
nifD_1
Unannotated protein; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.963
nifH
Unannotated protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
  
 0.903
nifK_2
Unannotated protein; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.842
nifD_2
Unannotated protein.
 
  
 0.837
DZA65_03871
Unannotated protein.
 
  
 0.808
DZA65_03878
Unannotated protein.
 
  
 0.806
DZA65_03890
Unannotated protein.
 
     0.798
DZA65_03891
Unannotated protein.
 
  
 0.792
nifB
Unannotated protein.
  
     0.772
Your Current Organism:
Dickeya dianthicola
NCBI taxonomy Id: 1223570
Other names: D. dianthicola NCPPB 3534, Dickeya dianthicola NCPPB 3534
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.