STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAO30877.1IclR family transcriptional regulator; K10973. (267 aa)    
Predicted Functional Partners:
BAO31324.1
GntR family transcriptional regulator.
  
  
 0.570
rplU
50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.559
BAO30875.1
Iron-sulfur binding protein.
       0.555
BAO30876.1
Fe-S oxidoreductase.
  
    0.553
BAO31218.1
GntR family transcriptional regulator.
  
  
 0.528
BAO30874.1
Hypothetical protein; K00782.
       0.525
BAO30873.1
Thioredoxin-like protein.
       0.516
BAO30679.1
GntR family transcriptional regulator; K13637.
 
  
 0.507
rpmA
50S ribosomal subunit protein L27; K02899; Belongs to the bacterial ribosomal protein bL27 family.
       0.496
Your Current Organism:
Sulfuritalea hydrogenivorans
NCBI taxonomy Id: 1223802
Other names: S. hydrogenivorans sk43H, Sulfuritalea hydrogenivorans DSM 22779, Sulfuritalea hydrogenivorans sk43H, Sulfuritalea hydrogenivorans str. sk43H, Sulfuritalea hydrogenivorans strain sk43H, sulfur-oxidizing bacterium DSM 22779
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.