STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU28384.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
SFU45707.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
  
 
 0.852
SFU30959.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.845
SFU39717.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.814
SFU53941.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
     
 0.780
SFU29703.1
Glyoxylase, beta-lactamase superfamily II.
  
 
 0.755
SFU28825.1
Protein of unknown function.
  
     0.736
SFU44007.1
Hypothetical protein.
  
     0.719
SFU59312.1
Protein of unknown function.
  
     0.705
SFU62531.1
Hypothetical protein.
 
     0.691
SFU44252.1
Outer membrane protein assembly factor BamA.
  
     0.687
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.