STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU29945.1Signal transducer regulating beta-lactamase production, contains metallopeptidase domain. (606 aa)    
Predicted Functional Partners:
SFU29961.1
Predicted transcriptional regulator.
 
 
  0.995
SFU76593.1
Predicted transcriptional regulator.
  
 
  0.971
SFU68243.1
Predicted transcriptional regulator.
 
 
  0.969
SFU65043.1
Predicted transcriptional regulator.
 
 
  0.830
SFU76603.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
  
  
 
0.789
SFU38141.1
N-acetylmuramoyl-L-alanine amidase.
 
   
  0.633
SFU55706.1
Hypothetical protein.
  
     0.538
SFU53108.1
Cold shock protein, CspA family.
  
     0.483
SFU55965.1
Hypothetical protein.
  
     0.455
SFU29974.1
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase.
       0.428
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.