STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU32612.1Lipocalin-like domain-containing protein. (153 aa)    
Predicted Functional Partners:
SFU32624.1
Outer membrane protein OmpA.
 
     0.916
SFU32145.1
N-Dimethylarginine dimethylaminohydrolase.
  
     0.660
SFU27214.1
Protein of unknown function.
  
     0.657
SFU34035.1
Hypothetical protein.
  
     0.585
SFU27182.1
Gas vesicle protein.
  
     0.520
SFU28825.1
Protein of unknown function.
  
     0.506
SFU32601.1
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
       0.506
SFU27186.1
Hypothetical protein.
  
     0.479
SFU55965.1
Hypothetical protein.
  
     0.474
SFU31265.1
Hypothetical protein.
  
     0.470
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.