STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU48813.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
SFU48727.1
Hypothetical protein.
       0.773
SFU48739.1
Protein of unknown function.
       0.773
SFU48747.1
Hypothetical protein.
       0.773
SFU48762.1
Hypothetical protein.
       0.773
SFU48771.1
Hypothetical protein.
       0.773
SFU48788.1
Hypothetical protein.
       0.773
SFU48798.1
Hypothetical protein.
       0.773
SFU48820.1
Hypothetical protein.
       0.547
SFU48835.1
Hypothetical protein.
       0.547
SFU48850.1
Hypothetical protein.
       0.547
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.