STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU52427.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
SFU52402.1
Hypothetical protein.
       0.773
SFU52409.1
Hypothetical protein.
       0.773
SFU52434.1
Hypothetical protein.
       0.601
SFU52388.1
Hypothetical protein.
       0.536
SFU52378.1
Hypothetical protein.
       0.526
SFU52448.1
Hypothetical protein.
       0.507
SFU52461.1
Acetolactate decarboxylase.
       0.507
SFU52473.1
Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family.
       0.495
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.