STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU55757.1RNA polymerase sigma-70 factor, ECF subfamily. (169 aa)    
Predicted Functional Partners:
SFU55763.1
Hypothetical protein.
 
     0.890
SFU55770.1
Protein of unknown function.
 
     0.858
SFU55781.1
Protein of unknown function.
 
     0.837
SFU55728.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.757
SFU62356.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.749
SFU55833.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.746
SFU49671.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.730
SFU37499.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.704
SFU55460.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.688
SFU71203.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.681
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.