STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU58254.1Iron complex outermembrane recepter protein. (610 aa)    
Predicted Functional Partners:
SFU56226.1
Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family.
 
     0.584
SFU58268.1
comF family protein.
       0.554
SFU46956.1
Starch-binding associating with outer membrane.
  
 
   0.516
SFU28595.1
Hypothetical protein.
    
   0.491
SFU31048.1
Hypothetical protein.
    
   0.491
SFU57541.1
Protein TonB.
    
   0.491
SFU57554.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
    
   0.491
SFU61908.1
Glycosyltransferase, GT2 family.
  
     0.490
SFU33683.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.485
SFU29781.1
Protein of unknown function.
  
     0.470
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.