STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU75061.1Carbonic anhydrase. (208 aa)    
Predicted Functional Partners:
SFU51000.1
Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily.
    
 0.936
SFU55181.1
Formate/nitrite transporter FocA, FNT family.
  
    0.805
SFU78312.1
Sulfate permease, SulP family.
 
 
 0.782
SFU75085.1
Transcriptional regulator, DeoR family.
  
    0.579
SFU75067.1
Ribosomal-protein-alanine N-acetyltransferase.
       0.578
SFU75078.1
Hypothetical protein.
       0.578
SFU75030.1
Hypothetical protein.
       0.475
SFU75040.1
PrcB C-terminal.
       0.475
SFU75054.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
       0.475
SFU75021.1
SanA protein.
       0.461
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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