STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU76121.1Putative ABC transport system permease protein. (416 aa)    
Predicted Functional Partners:
SFU76116.1
Putative ABC transport system ATP-binding protein.
 0.987
SFU76133.1
Hypothetical protein.
 
     0.950
SFU38890.1
Putative ABC transport system ATP-binding protein.
   
 0.807
SFU61762.1
Putative ABC transport system ATP-binding protein.
 
 
 0.807
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
 0.807
SFU74448.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.774
SFU76104.1
GTPase, G3E family.
 
     0.744
SFU76091.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
 
     0.561
SFU37568.1
Iron complex outermembrane recepter protein.
  
    0.455
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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