STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU77149.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
SFU77159.1
Hypothetical protein.
       0.773
SFU77169.1
Hypothetical protein.
       0.762
SFU77188.1
Hypothetical protein.
       0.704
SFU77107.1
Hypothetical protein.
       0.543
SFU77117.1
Hypothetical protein.
       0.543
SFU77122.1
Hypothetical protein.
       0.543
SFU77126.1
Hypothetical protein.
       0.543
SFU77136.1
Iron complex outermembrane recepter protein.
       0.543
SFU77139.1
Hypothetical protein.
       0.543
SFU77092.1
Hypothetical protein.
       0.536
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.