STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC34452.1Uncharacterized hydrophobic domain-containing protein. (318 aa)    
Predicted Functional Partners:
SFC34503.1
Hypothetical protein.
       0.768
SFC34537.1
Fe-S oxidoreductase.
       0.712
SFC34410.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.678
SFD79879.1
HicB family protein.
  
     0.603
SFD79909.1
Putative adhesin.
  
     0.455
SFC34565.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.453
Your Current Organism:
Klenkia taihuensis
NCBI taxonomy Id: 1225127
Other names: CGMCC 1.12303, DSM 45962, Geodermatophilus taihuensis, Geodermatophilus taihuensis Qu et al. 2013, K. taihuensis, Klenkia taihuensis (Qu et al. 2013) Montero-Calasanz et al. 2018, NBRC 109416, bacterium 3-wff-81, strain 3-wff-81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.