STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RM11_076830S ribosomal protein S5. (182 aa)    
Predicted Functional Partners:
RM11_0188
30S ribosomal protein S15.
   
 0.999
RM11_0433
30S ribosomal protein S18.
   
 0.999
RM11_0434
30S ribosomal protein S6.
   
 0.999
RM11_0590
30S ribosomal protein S4.
 
 0.999
RM11_0630
50S ribosomal protein L13.
 
 0.999
RM11_0631
30S ribosomal protein S9.
 
 0.999
RM11_0664
30S ribosomal protein S2.
  
 0.999
RM11_0677
50S ribosomal protein L10.
  
 0.999
RM11_0678
50S ribosomal protein L1.
  
 0.999
RM11_0762
30S ribosomal protein S11.
 
 0.999
Your Current Organism:
Bartonella quintana
NCBI taxonomy Id: 1225179
Other names: B. quintana RM-11, Bartonella quintana RM-11, Bartonella quintana RM_11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.