STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310615_03805Unannotated protein. (110 aa)    
Predicted Functional Partners:
GCA_001310615_03806
Unannotated protein.
 0.998
GCA_001310615_03804
Unannotated protein.
     0.994
GCA_001310615_00875
Unannotated protein.
   
 0.798
GCA_001310615_00876
Unannotated protein.
   
 0.798
GCA_001310615_00105
Unannotated protein.
  
 
 0.791
GCA_001310615_04469
Unannotated protein.
  
 
 0.791
GCA_001310615_05011
Unannotated protein.
  
 
 0.791
GCA_001310615_03807
Unannotated protein.
 
   
 0.777
GCA_001310615_04712
Unannotated protein.
   
 
 0.769
GCA_001310615_00871
Unannotated protein.
     
 0.746
Your Current Organism:
Thalassobacillus sp. C254
NCBI taxonomy Id: 1225341
Other names: T. sp. C254, Thalassobacillus sp. JCM 19033
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.