STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQI71976.1Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)    
Predicted Functional Partners:
KQI71971.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.747
KQI71975.1
Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
KQI71974.1
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.699
KQI71973.1
glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities.
       0.696
KQI71972.1
Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.695
KQI71970.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.653
KQI72815.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.625
KQI72456.1
Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.420
Your Current Organism:
Loktanella sp. 5RATIMAR09
NCBI taxonomy Id: 1225655
Other names: L. sp. 5RATIMAR09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.