STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001238295_03846Unannotated protein. (256 aa)    
Predicted Functional Partners:
GCA_001238295_03845
Unannotated protein.
 
 
  0.977
GCA_001238295_03847
Unannotated protein.
 
  
  0.977
GCA_001238295_02393
Unannotated protein.
 
 0.922
GCA_001238295_02002
Unannotated protein.
  
 0.920
GCA_001238295_04051
Unannotated protein.
  
 0.920
GCA_001238295_03844
Unannotated protein.
 
    0.919
GCA_001238295_04050
Unannotated protein.
  
 
 0.871
GCA_001238295_01117
Unannotated protein.
 
  
  0.867
GCA_001238295_00739
Unannotated protein.
    
 0.842
GCA_001238295_00738
Unannotated protein.
    
 0.841
Your Current Organism:
Ruegeria sp. 6PALISEP08
NCBI taxonomy Id: 1225660
Other names: R. sp. 6PALISEP08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.