STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001238295_04196Unannotated protein. (510 aa)    
Predicted Functional Partners:
GCA_001238295_00493
Unannotated protein.
   
 
 0.880
GCA_001238295_00354
Unannotated protein.
     
 0.759
GCA_001238295_00570
Unannotated protein.
    
  0.671
GCA_001238295_00284
Unannotated protein.
 
 
  0.606
GCA_001238295_01751
Unannotated protein.
     
 0.557
GCA_001238295_02065
Unannotated protein.
    
 0.514
GCA_001238295_01234
Unannotated protein.
    
 0.513
GCA_001238295_00355
Unannotated protein.
     
 0.499
GCA_001238295_01518
Unannotated protein.
  
  
 0.496
GCA_001238295_02512
Unannotated protein.
  
     0.488
Your Current Organism:
Ruegeria sp. 6PALISEP08
NCBI taxonomy Id: 1225660
Other names: R. sp. 6PALISEP08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.