Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NMB0266Conserved hypothetical protein; Identified by similarity to EGAD:107494; match to protein family HMM PF03413. (108 aa)    
Predicted Functional Partners:
NMB0313
Conserved hypothetical protein; Identified by similarity to GP:3523136; match to protein family HMM PF04575; match to protein family HMM PF07719.
  
     0.739
NMB1508
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.715
NMB1580
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.715
NMB0341
tspA protein; Identified by similarity to GP:3413497; match to protein family HMM PF01476.
  
    0.686
NMB1440
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.686
NMB0734
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.672
NMB1040
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.672
mlp
Lipoprotein; Identified by similarity to EGAD:40759; match to protein family HMM PF04355.
  
     0.661
NMB1818
Putative lipopolysaccharide biosynthesis protein; Identified by similarity to EGAD:165571; match to protein family HMM PF01943.
  
     0.655
NMB1531
Conserved hypothetical protein; Identified by similarity to EGAD:29187.
  
     0.653
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
Server load: low (16%) [HD]