Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NMB0283Conserved hypothetical protein; Identified by similarity to EGAD:155656; match to protein family HMM PF03641; match to protein family HMM TIGR00730; Belongs to the LOG family. (210 aa)    
Predicted Functional Partners:
purB
Adenylosuccinate lyase; Identified by similarity to EGAD:14517; match to protein family HMM PF00206; match to protein family HMM TIGR00928; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.576
pmbA
pmbA protein; Identified by similarity to EGAD:28167; match to protein family HMM PF01523.
   
    0.438
NMB0282
Ribonuclease II-related protein; Identified by similarity to EGAD:28723; match to protein family HMM PF00773.
  
    0.424
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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