| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NMB0286 | dinG | NMB0286 | NMB0287 | Conserved hypothetical protein; Identified by similarity to EGAD:5824; match to protein family HMM PF04391. | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.658 |
| NMB1387 | dinG | NMB1387 | NMB0287 | Hypothetical protein; Identified by Glimmer2; putative. | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.659 |
| NMB1387 | rpoA | NMB1387 | NMB0168 | Hypothetical protein; Identified by Glimmer2; putative. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.665 |
| NMB1387 | rpoB | NMB1387 | NMB0132 | Hypothetical protein; Identified by Glimmer2; putative. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.634 |
| NMB1387 | rpoZ | NMB1387 | NMB1660 | Hypothetical protein; Identified by Glimmer2; putative. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity). | 0.645 |
| dinG | NMB0286 | NMB0287 | NMB0286 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | Conserved hypothetical protein; Identified by similarity to EGAD:5824; match to protein family HMM PF04391. | 0.658 |
| dinG | NMB1387 | NMB0287 | NMB1387 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.659 |
| dinG | dnaN | NMB0287 | NMB1902 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.910 |
| dinG | dnaQ-1 | NMB0287 | NMB1451 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA polymerase III, epsilon subunit; Identified by similarity to EGAD:157346; match to protein family HMM PF00929; match to protein family HMM TIGR00573. | 0.718 |
| dinG | polA | NMB0287 | NMB1982 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.935 |
| dinG | recA | NMB0287 | NMB1445 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.708 |
| dinG | rpoA | NMB0287 | NMB0168 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.880 |
| dinG | rpoB | NMB0287 | NMB0132 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.859 |
| dinG | rpoZ | NMB0287 | NMB1660 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity). | 0.794 |
| dinG | topA | NMB0287 | NMB0118 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.789 |
| dnaN | dinG | NMB1902 | NMB0287 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.910 |
| dnaN | dnaQ-1 | NMB1902 | NMB1451 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III, epsilon subunit; Identified by similarity to EGAD:157346; match to protein family HMM PF00929; match to protein family HMM TIGR00573. | 0.973 |
| dnaN | polA | NMB1902 | NMB1982 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.994 |
| dnaN | recA | NMB1902 | NMB1445 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.896 |
| dnaN | rpoA | NMB1902 | NMB0168 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.560 |