STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiCN-acetylmuramoyl-L-alanine amidase; Cell-wall hydrolase involved in septum cleavage during cell division; Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family. (416 aa)    
Predicted Functional Partners:
NMB1085
Putative N-acetylmuramoyl-L-alanine amidase; Identified by similarity to EGAD:21606.
     
 0.971
NMB0987
Putative N-acetylmuramoyl-L-alanine amidase; Identified by similarity to EGAD:21606.
     
  0.900
NMB0457
Conserved hypothetical protein; Identified by similarity to EGAD:8343; match to protein family HMM PF02367; match to protein family HMM TIGR00150.
  
   0.859
NMB0315
Conserved hypothetical protein; Identified by similarity to GP:146890; match to protein family HMM PF01551.
  
   
 0.559
queC
Putative aluminum resistance protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
      
 0.555
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
  
  
 0.545
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
      
 0.532
NMB1483
Putative lipoprotein NlpD; Identified by similarity to EGAD:20336; match to protein family HMM PF01476; match to protein family HMM PF01551.
  
  
 0.530
zupT
Conserved hypothetical protein; Mediates zinc uptake. May also transport other divalent cations (By similarity); Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
      
 0.529
NMB0406
Conserved hypothetical protein; Identified by similarity to EGAD:40704; match to protein family HMM PF05036; match to protein family HMM TIGR02223.
   
 
 0.523
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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