Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NMB0481Hypothetical protein; Identified by Glimmer2; putative. (110 aa)    
Predicted Functional Partners:
NMB0480
TspB-related protein; Identified by similarity to GP:3758871.
  
    0.799
NMB0485
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.516
NMB0482
Hypothetical protein; Identified by Glimmer2; putative.
       0.512
NMB0483
Hypothetical protein; Identified by Glimmer2; putative.
       0.512
NMB0484
Hypothetical protein; Identified by Glimmer2; putative.
       0.512
mtrE
Multidrug efflux pump channel protein; Identified by similarity to EGAD:17129; match to protein family HMM PF02321; match to protein family HMM TIGR01845.
   
    0.484
dsbB
Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
   
    0.417
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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