STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB0502Hypothetical protein; Identified by Glimmer2; putative. (650 aa)    
Predicted Functional Partners:
NMB0503
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.937
NMB0501
Hypothetical protein; Identified by Glimmer2; putative.
       0.658
NMB0496
Hemolysin activator-related protein; Identified by similarity to EGAD:10212; match to protein family HMM PF03865.
 
 
   0.575
NMB0493
Identified by similarity to GP:2623258; match to protein family HMM PF05594; match to protein family HMM PF05860; match to protein family HMM TIGR01731; match to protein family HMM TIGR01901.
 
     0.535
NMB1762
Putative hemolysin activation protein HecB; Identified by similarity to EGAD:149243; match to protein family HMM PF03865.
  
   0.509
NMB1768
Identified by similarity to EGAD:18919; match to protein family HMM PF05594; match to protein family HMM PF05860; match to protein family HMM TIGR01731; match to protein family HMM TIGR01901.
  
    0.499
NMB1780
Putative hemolysin activation protein HecB; Identified by similarity to EGAD:131262; match to protein family HMM PF03865.
  
 
   0.480
NMB0504
Hypothetical protein; Identified by Glimmer2; putative.
       0.417
NMB0499
Hypothetical protein; Identified by Glimmer2; putative.
 
    
0.410
NMB1112
Conserved hypothetical protein; Identified by similarity to EGAD:28504; match to protein family HMM PF07409.
   
    0.410
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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