STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB0726Type II restriction enzyme HgaI; Identified by similarity to EGAD:14414. (489 aa)    
Predicted Functional Partners:
NMB0727
N-6 adenine-specific DNA methylase; Identified by similarity to EGAD:89170; match to protein family HMM PF01555; Belongs to the N(4)/N(6)-methyltransferase family.
  
    0.831
NMB0725
Modification methylase HgaI-1; Identified by similarity to EGAD:15667; match to protein family HMM PF00145; match to protein family HMM TIGR00675; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
  
    0.811
NMB1265
Conserved hypothetical protein; Identified by similarity to EGAD:44606; match to protein family HMM PF01909.
   
    0.800
NMB1755
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.800
pheT
phenylalanyl-tRNA synthetase, beta chain; Identified by similarity to EGAD:16045; match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.693
NMB0488
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.572
NMB1760
Conserved hypothetical protein; Identified by similarity to EGAD:166833.
   
    0.572
NMB1761
Conserved hypothetical protein; Identified by similarity to EGAD:97133; match to protein family HMM PF07804; match to protein family HMM PF07805.
   
    0.572
pivNM-2
Pilin gene inverting protein PivNM-2; Identified by similarity to EGAD:138632; match to protein family HMM PF01548; match to protein family HMM PF02371.
   
    0.514
himA
Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
       0.511
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.