STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB0806Conserved hypothetical protein; Identified by similarity to EGAD:156128; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family. (252 aa)    
Predicted Functional Partners:
nadK
Conserved hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
    0.706
NMB0808
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.659
der
Essential GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.612
NMB0809
Conserved hypothetical protein; Identified by similarity to EGAD:91119.
       0.529
NMB0282
Ribonuclease II-related protein; Identified by similarity to EGAD:28723; match to protein family HMM PF00773.
  
 
   0.528
NMB0739
Conserved hypothetical protein; Identified by similarity to EGAD:108433; match to protein family HMM PF01926; match to protein family HMM PF04079; match to protein family HMM TIGR00650.
  
  
 0.517
cmk
Cytidylate kinase; Identified by similarity to EGAD:10189; match to protein family HMM PF02224; match to protein family HMM TIGR00017.
  
    0.463
exoA
Exodeoxyribonuclease; Identified by similarity to EGAD:19899; match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.
   
    0.451
xthA
Exodeoxyribonuclease III; Identified by similarity to EGAD:104607; match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.
   
    0.449
murB
UDP-N-acetylpyruvoylglucosamine reductase; Cell wall formation.
  
    0.448
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.