Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NMB0830Conserved hypothetical protein; Identified by similarity to GP:4324608. (336 aa)    
Predicted Functional Partners:
hsdM
Type I restriction enzyme EcoR124II M protein; Identified by similarity to GP:450688; match to protein family HMM PF02384; match to protein family HMM PF02506; match to protein family HMM TIGR00497.
  
    0.927
rfaD
ADP-L-glycero-D-mannoheptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose.
  
    0.568
NMB0833
Type I restriction enzyme-related protein; Identified by similarity to EGAD:28865.
  
    0.514
NMB0835
Putative type I restriction enzyme EcoR124II R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.514
NMB1924
Identified by similarity to GP:1658411; match to protein family HMM PF00459.
  
    0.468
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
Server load: low (12%) [HD]