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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB0899Hypothetical protein; Identified by Glimmer2; putative. (118 aa)    
Predicted Functional Partners:
NMB1853
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.800
NMB0898
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.635
NMB0495
Replication protein; Identified by similarity to EGAD:24391; match to protein family HMM PF01051.
   
    0.483
NMB1757
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.472
NMB0900
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.459
NMB1761
Conserved hypothetical protein; Identified by similarity to EGAD:97133; match to protein family HMM PF07804; match to protein family HMM PF07805.
   
    0.414
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.