Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NMB0901D-lactate dehydrogenase-related protein; Identified by similarity to GP:4405961. (94 aa)    
Predicted Functional Partners:
NMB0904
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.637
NMB0902
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.595
NMB0903
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.595
NMB0905
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.552
lldD
L-lactate dehydrogenase; Identified by similarity to GP:4761135; match to protein family HMM PF01070.
      
 0.501
NMB0906
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.401
thdF
Thiophene and furan oxidation protein ThdF; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
    0.401
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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