STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB1042Cation transport ATPase, E1-E2 family; Identified by similarity to EGAD:135627; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525. (823 aa)    
Predicted Functional Partners:
NMB1040
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.779
hflX
GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.776
NMB1271
Putative mercury transport periplasmic protein; Identified by similarity to EGAD:28925; match to protein family HMM PF00403.
  
 
 0.774
NMB1454
Ferredoxin, 4Fe-4S bacterial type; Identified by similarity to EGAD:40049; match to protein family HMM PF00037.
 
  
 0.593
fixO
Cytochrome c oxidase, subunit II; Identified by similarity to EGAD:20716; match to protein family HMM PF02433; match to protein family HMM TIGR00781.
 
   
 0.581
fixS
fixS protein; Identified by similarity to GP:2398785; match to protein family HMM PF03597; match to protein family HMM TIGR00847.
 
  
 0.574
NMB0759
Conserved hypothetical protein; Identified by similarity to EGAD:89407.
 
     0.569
fixP
Cytochrome c oxidase, subunit III; Identified by similarity to EGAD:24821; match to protein family HMM PF00034; match to protein family HMM TIGR00782.
 
   
 0.559
fixN
Cytochrome c oxidase, subunit I; Identified by similarity to EGAD:125980; match to protein family HMM PF00115; match to protein family HMM TIGR00780; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.559
pilB
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity).
  
 
 0.513
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.