Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NMB1098Putative I protein; Identified by similarity to EGAD:28500. (353 aa)    
Predicted Functional Partners:
NMB1095
Conserved hypothetical protein; Identified by similarity to EGAD:28497; match to protein family HMM PF06074.
 
    0.819
NMB1094
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.796
NMB1096
Conserved hypothetical protein; Identified by similarity to EGAD:28498; match to protein family HMM PF04233; match to protein family HMM TIGR01641.
 
    0.794
NMB1110
Tail protein, 43 kDa; Identified by similarity to EGAD:94050; match to protein family HMM PF06893.
 
    0.792
NMB1101
Conserved hypothetical protein; Identified by similarity to EGAD:28494; match to protein family HMM PF07030.
 
     0.788
NMB1108
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.786
NMB1109
Putative phage virion protein; Identified by similarity to EGAD:28510; match to protein family HMM PF07157.
 
     0.786
NMB1111
Putative baseplate assembly protein V; Identified by similarity to EGAD:28503; match to protein family HMM PF06890; match to protein family HMM TIGR01644.
 
    0.786
NMB0985
E16-related protein; Identified by similarity to EGAD:143986; match to protein family HMM PF06252.
 
    0.785
NMB1104
Phage sheath protein; Identified by similarity to EGAD:28506; match to protein family HMM PF06274.
 
     0.785
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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