STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB1102Hypothetical protein; Identified by Glimmer2; putative. (197 aa)    
Predicted Functional Partners:
NMB1104
Phage sheath protein; Identified by similarity to EGAD:28506; match to protein family HMM PF06274.
  
    0.795
NMB1103
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.777
NMB1101
Conserved hypothetical protein; Identified by similarity to EGAD:28494; match to protein family HMM PF07030.
  
    0.651
NMB1100
Hypothetical protein; Identified by Glimmer2; putative.
       0.627
NMB1105
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.616
NMB1106
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.587
NMB1099
Transposase, IS30 family; Identified by similarity to EGAD:9780; match to protein family HMM PF00665; match to protein family HMM TIGR01199.
       0.464
NMB1882
TonB-dependent receptor; Identified by similarity to EGAD:8251; match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783.
   
    0.400
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.