Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
NMB0201 | NMB1095 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to EGAD:28497; match to protein family HMM PF06074. | 0.408 |
NMB0201 | NMB1115 | Hypothetical protein; Identified by Glimmer2; putative. | Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. | 0.414 |
NMB0725 | NMB1115 | Modification methylase HgaI-1; Identified by similarity to EGAD:15667; match to protein family HMM PF00145; match to protein family HMM TIGR00675; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. | 0.408 |
NMB1095 | NMB0201 | Conserved hypothetical protein; Identified by similarity to EGAD:28497; match to protein family HMM PF06074. | Hypothetical protein; Identified by Glimmer2; putative. | 0.408 |
NMB1095 | NMB1114 | Conserved hypothetical protein; Identified by similarity to EGAD:28497; match to protein family HMM PF06074. | Conserved hypothetical protein; Identified by similarity to EGAD:91160. | 0.754 |
NMB1095 | NMB1115 | Conserved hypothetical protein; Identified by similarity to EGAD:28497; match to protein family HMM PF06074. | Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. | 0.454 |
NMB1095 | NMB1542 | Conserved hypothetical protein; Identified by similarity to EGAD:28497; match to protein family HMM PF06074. | Hypothetical protein; Identified by Glimmer2; putative. | 0.800 |
NMB1114 | NMB1095 | Conserved hypothetical protein; Identified by similarity to EGAD:91160. | Conserved hypothetical protein; Identified by similarity to EGAD:28497; match to protein family HMM PF06074. | 0.754 |
NMB1114 | NMB1115 | Conserved hypothetical protein; Identified by similarity to EGAD:91160. | Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. | 0.812 |
NMB1115 | NMB0201 | Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. | Hypothetical protein; Identified by Glimmer2; putative. | 0.414 |
NMB1115 | NMB0725 | Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. | Modification methylase HgaI-1; Identified by similarity to EGAD:15667; match to protein family HMM PF00145; match to protein family HMM TIGR00675; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.408 |
NMB1115 | NMB1095 | Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. | Conserved hypothetical protein; Identified by similarity to EGAD:28497; match to protein family HMM PF06074. | 0.454 |
NMB1115 | NMB1114 | Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. | Conserved hypothetical protein; Identified by similarity to EGAD:91160. | 0.812 |
NMB1115 | NMB1542 | Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. | Hypothetical protein; Identified by Glimmer2; putative. | 0.639 |
NMB1542 | NMB1095 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to EGAD:28497; match to protein family HMM PF06074. | 0.800 |
NMB1542 | NMB1115 | Hypothetical protein; Identified by Glimmer2; putative. | Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. | 0.639 |