STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB1115Putative tail fibre protein; Identified by similarity to EGAD:68685; match to protein family HMM PF07484. (657 aa)    
Predicted Functional Partners:
NMB1114
Conserved hypothetical protein; Identified by similarity to EGAD:91160.
  
  
 0.812
NMB1542
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.639
NMB1095
Conserved hypothetical protein; Identified by similarity to EGAD:28497; match to protein family HMM PF06074.
  
    0.454
NMB0201
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.414
NMB0725
Modification methylase HgaI-1; Identified by similarity to EGAD:15667; match to protein family HMM PF00145; match to protein family HMM TIGR00675; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
    0.408
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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