STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB1204Transcriptional regulator; Identified by similarity to EGAD:10979; match to protein family HMM PF01381. (106 aa)    
Predicted Functional Partners:
glnD
protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism.
     
 0.747
NMB0541
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.726
NMB2106
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.726
NMB1205
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.703
NMB1761
Conserved hypothetical protein; Identified by similarity to EGAD:97133; match to protein family HMM PF07804; match to protein family HMM PF07805.
 
 
 0.550
NMB1202
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.453
bfrB
Bacterioferritin B; Iron-storage protein.
  
    0.438
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
      
 0.426
NMB0341
tspA protein; Identified by similarity to GP:3413497; match to protein family HMM PF01476.
  
     0.410
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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