Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NMB1204Transcriptional regulator; Identified by similarity to EGAD:10979; match to protein family HMM PF01381. (106 aa)    
Predicted Functional Partners:
NMB0541
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.774
NMB2106
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.774
NMB1205
Hypothetical protein; Identified by Glimmer2; putative.
       0.701
glnD
protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism.
       0.623
NMB1202
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.450
bfrB
Bacterioferritin B; Iron-storage protein.
       0.436
NMB0341
tspA protein; Identified by similarity to GP:3413497; match to protein family HMM PF01476.
  
     0.410
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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