Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
NMB1227Conserved hypothetical protein; Identified by similarity to EGAD:132841; match to protein family HMM PF04635. (131 aa)    
Predicted Functional Partners:
smg
Putative smg protein; Identified by similarity to EGAD:6532; match to protein family HMM PF04361; Belongs to the Smg family.
  
     0.654
NMB0454
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.623
NMB1226
ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.
       0.563
porA
Outer membrane protein PorA; Serves as a slightly cation selective porin. Major antigen on the gonococcal cell surface and it may have pathogenic properties in addition to its porin activity.
  
     0.562
metM
Homoserine dehydrogenase; Identified by similarity to EGAD:6746; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.
  
    0.547
NMB1229
Hypothetical protein; Identified by Glimmer2; putative.
       0.511
NMB1345
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.511
NMB1269
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.485
NMB1565
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.484
NMB1349
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.463
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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