NMB1240 protein (Neisseria meningitidis) - STRING interaction network

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NMB1240

ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005. (542 aa)

Predicted Functional Partners:

rplU

0.692

rpsC

0.679

rpmD

0.678

rpsO

0.678

rpmH

0.677

rpsJ

0.673

rplC

0.673

rplW

0.673

rpsS

0.673

rplR

0.672

Your Current Organism:

Neisseria meningitidis

NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NMB1240	rplC	NMB1240	NMB0142	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.673
NMB1240	rplR	NMB1240	NMB0158	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.672
NMB1240	rplU	NMB1240	NMB0325	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.692
NMB1240	rplW	NMB1240	NMB0144	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.	0.673
NMB1240	rpmD	NMB1240	NMB0160	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	50S ribosomal protein L30; Identified by similarity to EGAD:29418; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	0.678
NMB1240	rpmH	NMB1240	NMB1904	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	50S ribosomal protein L34; Identified by similarity to EGAD:89834; match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.677
NMB1240	rpsC	NMB1240	NMB0148	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.679
NMB1240	rpsJ	NMB1240	NMB0140	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.673
NMB1240	rpsO	NMB1240	NMB0609	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	30s ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.678
NMB1240	rpsS	NMB1240	NMB0146	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.673
rplC	NMB1240	NMB0142	NMB1240	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	ABC transporter, ATP-binding protein; Identified by similarity to EGAD:91449; match to protein family HMM PF00005.	0.673
rplC	rplR	NMB0142	NMB0158	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.998
rplC	rplU	NMB0142	NMB0325	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplC	rplW	NMB0142	NMB0144	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.	0.999
rplC	rpmD	NMB0142	NMB0160	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L30; Identified by similarity to EGAD:29418; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	0.996
rplC	rpmH	NMB0142	NMB1904	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L34; Identified by similarity to EGAD:89834; match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.912
rplC	rpsC	NMB0142	NMB0148	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplC	rpsJ	NMB0142	NMB0140	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.995
rplC	rpsO	NMB0142	NMB0609	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30s ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.987
rplC	rpsS	NMB0142	NMB0146	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999

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