STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB1305Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. (275 aa)    
Predicted Functional Partners:
NMB1304
Alcohol dehydrogenase, class III; Identified by similarity to EGAD:28823; match to protein family HMM PF00107; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 0.999
sodB
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
  
 0.604
trxB
Thioredoxin reductase; Identified by similarity to EGAD:28163; match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292.
   
  
 0.603
NMB1303
Transcriptional regulator, MerR family; Identified by similarity to EGAD:28824; match to protein family HMM PF00376.
  
  
 0.536
norB
Nitric oxide reductase; Identified by similarity to GP:2584871.
      
 0.524
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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