Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
porAOuter membrane protein PorA; Serves as a slightly cation selective porin. Major antigen on the gonococcal cell surface and it may have pathogenic properties in addition to its porin activity. (392 aa)    
Predicted Functional Partners:
rmpM
Outer membrane protein class 4; Identified by similarity to EGAD:10394; match to protein family HMM PF00691.
  
 0.897
ctrA
Capsule polysaccharide export outer membrane protein CtrA; Involved in transport of capsular polysaccharides to the cell surface. May function as a membrane anchor for capsular polysaccharides. Possible porin properties; Belongs to the BexD/CtrA/VexA family.
     
 0.849
NMB0928
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.779
nadA
Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.
   
  
 0.776
opc
Class 5 outer membrane protein; Identified by similarity to GP:1177565; match to protein family HMM PF07239.
      
 0.774
penA
Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
   
  
 0.773
fumC
Fumarate hydratase, class II, aerobic; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
      
 0.760
NMB0113
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.757
NMB1954
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.754
NMB1345
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.724
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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