Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NMB1437Conserved hypothetical protein; Identified by similarity to EGAD:89507; match to protein family HMM PF02589. (233 aa)    
Predicted Functional Partners:
NMB1438
Conserved hypothetical protein; Identified by similarity to EGAD:89509; match to protein family HMM PF00037; match to protein family HMM TIGR00273.
 
 
 0.997
NMB1436
Conserved hypothetical protein; Identified by similarity to EGAD:89510; match to protein family HMM PF02754.
 
 
 0.994
NMB0998
Putative oxidoreductase; Identified by similarity to EGAD:156263; match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913.
  
 
 0.748
NMB0631
Putative phosphate acetyltransferase Pta; Identified by similarity to EGAD:28215; match to protein family HMM PF01515; match to protein family HMM TIGR00651.
  
  
 0.498
NMB1711
Transcriptional regulator, GntR family; Identified by similarity to EGAD:37331; match to protein family HMM PF00392; match to protein family HMM PF07729.
 
     0.493
NMB0543
Putative L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
   
 0.473
NMB1435
Drug resistance translocase family protein; Identified by similarity to EGAD:20464; match to protein family HMM PF07690.
       0.419
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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