Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NMB1494Conserved hypothetical protein; Identified by similarity to EGAD:6530; match to protein family HMM PF04328. (64 aa)    
Predicted Functional Partners:
cstA
Carbon starvation protein A; Identified by similarity to EGAD:8578; match to protein family HMM PF02554.
  
    0.960
NMB1491
Hypothetical protein; Identified by Glimmer2; putative.
       0.565
NMB1492
Hypothetical protein; Identified by Glimmer2; putative.
       0.565
NMB1495
Hypothetical protein; Identified by Glimmer2; putative.
       0.437
NMB1263
CobW-related protein; Identified by similarity to EGAD:156097; match to protein family HMM PF02492; match to protein family HMM PF07683.
  
  
 0.419
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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