Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NMB1531Conserved hypothetical protein; Identified by similarity to EGAD:29187. (206 aa)    
Predicted Functional Partners:
NMB0313
Conserved hypothetical protein; Identified by similarity to GP:3523136; match to protein family HMM PF04575; match to protein family HMM PF07719.
  
     0.770
NMB1475
Conserved hypothetical protein; Identified by similarity to EGAD:28416.
  
     0.743
NMB1532
Conserved hypothetical protein; Identified by similarity to EGAD:28880; match to protein family HMM PF03794.
 
     0.727
mlp
Lipoprotein; Identified by similarity to EGAD:40759; match to protein family HMM PF04355.
  
    0.714
NMB0266
Conserved hypothetical protein; Identified by similarity to EGAD:107494; match to protein family HMM PF03413.
  
     0.653
hsf
Adhesin; Involved in adhesion of capsulated meningococci to host epithelial cells. Interacts with laminin and heparan sulfate, promoting the adherence to the extracellular matrix (ECM) components.
  
     0.653
lgtE
lacto-N-neotetraose biosynthesis glycosyl transferase LgtE; Adds the first galactose to the lacto-N-tetraose chain in lipooligosaccharide (LOS).
  
     0.643
NMB1753
VapD-related protein; Identified by similarity to EGAD:153654; match to protein family HMM PF04605.
  
     0.615
NMB1497
TonB-dependent receptor; Probable receptor, TonB-dependent.
  
    0.612
lgtB
lacto-N-neotetraose biosynthesis glycosyl transferase LgtB; Adds the second galactose to the lacto-N-tetraose chain in lipooligosaccharide (LOS).
  
     0.598
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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