Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NMB0356 | NMB1663 | NMB0356 | NMB1663 | ABC transporter, ATP-binding protein; Identified by similarity to EGAD:139998; match to protein family HMM PF00005. | Conserved hypothetical protein; Identified by similarity to EGAD:107896; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.459 |
| NMB1663 | NMB0356 | NMB1663 | NMB0356 | Conserved hypothetical protein; Identified by similarity to EGAD:107896; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | ABC transporter, ATP-binding protein; Identified by similarity to EGAD:139998; match to protein family HMM PF00005. | 0.459 |
| NMB1663 | NMB1886 | NMB1663 | NMB1886 | Conserved hypothetical protein; Identified by similarity to EGAD:107896; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Conserved hypothetical protein; Identified by similarity to EGAD:91612; match to protein family HMM PF01590. | 0.475 |
| NMB1663 | murU | NMB1663 | NMB1841 | Conserved hypothetical protein; Identified by similarity to EGAD:107896; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Mannose-1-phosphate guanyltransferase-related protein; Catalyzes the formation of UDP-N-acetylmuramate (UDP-MurNAc), a crucial precursor of the bacterial peptidoglycan cell wall, from UTP and MurNAc-alpha-1P. Is likely involved in peptidoglycan recycling as part of a cell wall recycling pathway that bypasses de novo biosynthesis of the peptidoglycan precursor UDP-MurNAc. Is able to complement the fosfomycin sensitivity phenotype of a P.putida mutant lacking murU. | 0.415 |
| NMB1663 | ribD | NMB1663 | NMB1817 | Conserved hypothetical protein; Identified by similarity to EGAD:107896; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.535 |
| NMB1886 | NMB1663 | NMB1886 | NMB1663 | Conserved hypothetical protein; Identified by similarity to EGAD:91612; match to protein family HMM PF01590. | Conserved hypothetical protein; Identified by similarity to EGAD:107896; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.475 |
| murU | NMB1663 | NMB1841 | NMB1663 | Mannose-1-phosphate guanyltransferase-related protein; Catalyzes the formation of UDP-N-acetylmuramate (UDP-MurNAc), a crucial precursor of the bacterial peptidoglycan cell wall, from UTP and MurNAc-alpha-1P. Is likely involved in peptidoglycan recycling as part of a cell wall recycling pathway that bypasses de novo biosynthesis of the peptidoglycan precursor UDP-MurNAc. Is able to complement the fosfomycin sensitivity phenotype of a P.putida mutant lacking murU. | Conserved hypothetical protein; Identified by similarity to EGAD:107896; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.415 |
| ribD | NMB1663 | NMB1817 | NMB1663 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Conserved hypothetical protein; Identified by similarity to EGAD:107896; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.535 |