tag protein (Neisseria meningitidis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

tag

DNA-3-methyladenine glycosylase I; Identified by similarity to EGAD:128731; match to protein family HMM PF03352. (183 aa)

Predicted Functional Partners:

NMB1674

0.776

NMB1670

0.774

pqiB

0.774

NMB1672

0.774

polA

0.578

NMB1675

0.433

NMB1669

0.418

Your Current Organism:

Neisseria meningitidis

NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NMB1669	NMB1670	NMB1669	NMB1670	Iron-starvation protein PigA; Identified by similarity to GP:3091146; match to protein family HMM PF01126.	PqiA family protein; Identified by similarity to EGAD:91640; match to protein family HMM PF04403; match to protein family HMM TIGR00155.	0.418
NMB1669	NMB1672	NMB1669	NMB1672	Iron-starvation protein PigA; Identified by similarity to GP:3091146; match to protein family HMM PF01126.	Conserved hypothetical protein; Identified by similarity to EGAD:91019; match to protein family HMM PF03886.	0.438
NMB1669	NMB1674	NMB1669	NMB1674	Iron-starvation protein PigA; Identified by similarity to GP:3091146; match to protein family HMM PF01126.	GDSL lipase family protein; Identified by similarity to EGAD:18113; match to protein family HMM PF00657.	0.488
NMB1669	pqiB	NMB1669	NMB1671	Iron-starvation protein PigA; Identified by similarity to GP:3091146; match to protein family HMM PF01126.	pqiB protein; Identified by similarity to EGAD:91619; match to protein family HMM PF02470.	0.418
NMB1669	tag	NMB1669	NMB1673	Iron-starvation protein PigA; Identified by similarity to GP:3091146; match to protein family HMM PF01126.	DNA-3-methyladenine glycosylase I; Identified by similarity to EGAD:128731; match to protein family HMM PF03352.	0.418
NMB1670	NMB1669	NMB1670	NMB1669	PqiA family protein; Identified by similarity to EGAD:91640; match to protein family HMM PF04403; match to protein family HMM TIGR00155.	Iron-starvation protein PigA; Identified by similarity to GP:3091146; match to protein family HMM PF01126.	0.418
NMB1670	NMB1672	NMB1670	NMB1672	PqiA family protein; Identified by similarity to EGAD:91640; match to protein family HMM PF04403; match to protein family HMM TIGR00155.	Conserved hypothetical protein; Identified by similarity to EGAD:91019; match to protein family HMM PF03886.	0.925
NMB1670	NMB1674	NMB1670	NMB1674	PqiA family protein; Identified by similarity to EGAD:91640; match to protein family HMM PF04403; match to protein family HMM TIGR00155.	GDSL lipase family protein; Identified by similarity to EGAD:18113; match to protein family HMM PF00657.	0.774
NMB1670	NMB1675	NMB1670	NMB1675	PqiA family protein; Identified by similarity to EGAD:91640; match to protein family HMM PF04403; match to protein family HMM TIGR00155.	Hypothetical protein; Identified by Glimmer2; putative.	0.433
NMB1670	pqiB	NMB1670	NMB1671	PqiA family protein; Identified by similarity to EGAD:91640; match to protein family HMM PF04403; match to protein family HMM TIGR00155.	pqiB protein; Identified by similarity to EGAD:91619; match to protein family HMM PF02470.	0.995
NMB1670	tag	NMB1670	NMB1673	PqiA family protein; Identified by similarity to EGAD:91640; match to protein family HMM PF04403; match to protein family HMM TIGR00155.	DNA-3-methyladenine glycosylase I; Identified by similarity to EGAD:128731; match to protein family HMM PF03352.	0.774
NMB1672	NMB1669	NMB1672	NMB1669	Conserved hypothetical protein; Identified by similarity to EGAD:91019; match to protein family HMM PF03886.	Iron-starvation protein PigA; Identified by similarity to GP:3091146; match to protein family HMM PF01126.	0.438
NMB1672	NMB1670	NMB1672	NMB1670	Conserved hypothetical protein; Identified by similarity to EGAD:91019; match to protein family HMM PF03886.	PqiA family protein; Identified by similarity to EGAD:91640; match to protein family HMM PF04403; match to protein family HMM TIGR00155.	0.925
NMB1672	NMB1674	NMB1672	NMB1674	Conserved hypothetical protein; Identified by similarity to EGAD:91019; match to protein family HMM PF03886.	GDSL lipase family protein; Identified by similarity to EGAD:18113; match to protein family HMM PF00657.	0.774
NMB1672	NMB1675	NMB1672	NMB1675	Conserved hypothetical protein; Identified by similarity to EGAD:91019; match to protein family HMM PF03886.	Hypothetical protein; Identified by Glimmer2; putative.	0.433
NMB1672	pqiB	NMB1672	NMB1671	Conserved hypothetical protein; Identified by similarity to EGAD:91019; match to protein family HMM PF03886.	pqiB protein; Identified by similarity to EGAD:91619; match to protein family HMM PF02470.	0.921
NMB1672	tag	NMB1672	NMB1673	Conserved hypothetical protein; Identified by similarity to EGAD:91019; match to protein family HMM PF03886.	DNA-3-methyladenine glycosylase I; Identified by similarity to EGAD:128731; match to protein family HMM PF03352.	0.774
NMB1674	NMB1669	NMB1674	NMB1669	GDSL lipase family protein; Identified by similarity to EGAD:18113; match to protein family HMM PF00657.	Iron-starvation protein PigA; Identified by similarity to GP:3091146; match to protein family HMM PF01126.	0.488
NMB1674	NMB1670	NMB1674	NMB1670	GDSL lipase family protein; Identified by similarity to EGAD:18113; match to protein family HMM PF00657.	PqiA family protein; Identified by similarity to EGAD:91640; match to protein family HMM PF04403; match to protein family HMM TIGR00155.	0.774
NMB1674	NMB1672	NMB1674	NMB1672	GDSL lipase family protein; Identified by similarity to EGAD:18113; match to protein family HMM PF00657.	Conserved hypothetical protein; Identified by similarity to EGAD:91019; match to protein family HMM PF03886.	0.774

page 1 of 3

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Textmining

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About