Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
NMB1738Putative secretion protein; Identified by similarity to GP:558154; match to protein family HMM PF00529; match to protein family HMM TIGR01843. (475 aa)    
Predicted Functional Partners:
NMB1400
ABC transporter family protein; Identified by similarity to GP:505571; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01846.
 
 
 0.993
NMB1737
Putative secretion protein; Identified by similarity to EGAD:40992; match to protein family HMM PF02321.
 
 
 0.985
ybjZ
ABC transporter, ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.896
frpC
Iron-regulated protein FrpC; May participate in the pathogenesis of meningococcal disease.
 
  
 0.882
frpA
Putative iron-regulated protein FrpA; May participate in the pathogenesis of meningococcal disease.
 
  
 0.811
NMB1405
FrpA/C-related protein; Identified by similarity to EGAD:22554.
 
  
 0.800
NMB0470
C4-dicarboxylate transporter; Identified by similarity to EGAD:107946; match to protein family HMM PF00939; match to protein family HMM TIGR00785.
   
  
 0.771
NMB0230
Conserved hypothetical protein; Identified by similarity to EGAD:28721; match to protein family HMM PF02682; match to protein family HMM TIGR00370.
      
 0.770
mtrE
Multidrug efflux pump channel protein; Identified by similarity to EGAD:17129; match to protein family HMM PF02321; match to protein family HMM TIGR01845.
  
 
 0.725
speA
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine.
   
  
 0.565
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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