Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NMB1748Conserved hypothetical protein; Identified by similarity to EGAD:69712. (96 aa)    
Predicted Functional Partners:
NMB1749
Conserved hypothetical protein; Identified by similarity to GP:3402502; match to protein family HMM PF05707.
  
    0.824
NMB1747
Putative tspB protein; Identified by similarity to GP:3758871; match to protein family HMM PF05616.
       0.773
NMB1746
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.642
NMB1762
Putative hemolysin activation protein HecB; Identified by similarity to EGAD:149243; match to protein family HMM PF03865.
   
    0.572
NMB1470
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.484
NMB1760
Conserved hypothetical protein; Identified by similarity to EGAD:166833.
   
    0.474
NMB1549
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.461
NMB1755
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.430
NMB0726
Type II restriction enzyme HgaI; Identified by similarity to EGAD:14414.
   
    0.426
NMB1742
Hypothetical protein; Identified by Glimmer2; putative.
       0.419
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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