STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB1768Identified by similarity to EGAD:18919; match to protein family HMM PF05594; match to protein family HMM PF05860; match to protein family HMM TIGR01731; match to protein family HMM TIGR01901. (2514 aa)    
Predicted Functional Partners:
NMB1762
Putative hemolysin activation protein HecB; Identified by similarity to EGAD:149243; match to protein family HMM PF03865.
 
 
 0.946
NMB0496
Hemolysin activator-related protein; Identified by similarity to EGAD:10212; match to protein family HMM PF03865.
  
   0.795
NMB1780
Putative hemolysin activation protein HecB; Identified by similarity to EGAD:131262; match to protein family HMM PF03865.
  
   0.795
NMB1767
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.776
NMB1763
Putative toxin-activating protein; Identified by similarity to EGAD:41441; match to protein family HMM PF02794.
 
    0.709
NMB1765
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.582
NMB1766
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.581
NMB1764
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.572
NMB1405
FrpA/C-related protein; Identified by similarity to EGAD:22554.
   
 
 0.566
NMB0808
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.554
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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