STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB1963Conserved hypothetical protein; Identified by similarity to EGAD:163193; match to protein family HMM PF05494. (196 aa)    
Predicted Functional Partners:
NMB1964
Conserved hypothetical protein; Identified by similarity to EGAD:28106; match to protein family HMM PF02470.
 
 0.995
NMB1965
Conserved hypothetical protein; Identified by similarity to EGAD:28097; match to protein family HMM PF02405; match to protein family HMM TIGR00056.
 
 
 0.988
NMB1962
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.975
NMB1966
ABC transporter, ATP-binding protein; Identified by similarity to EGAD:28098; match to protein family HMM PF00005.
 
 
 0.954
NMB1961
VacJ-related protein; Identified by similarity to EGAD:90986; match to protein family HMM PF04333.
 
 
 
 0.949
NMB1958
Putative thioredoxin; Identified by similarity to EGAD:109028.
     
 0.737
NMB1960
Hypothetical protein; Identified by Glimmer2; putative.
       0.692
NMB1959
Conserved hypothetical protein; Identified by similarity to EGAD:91226; match to protein family HMM PF03061; match to protein family HMM TIGR00051.
 
     0.691
fpr-1
ferredoxin--NADP reductase; Identified by similarity to EGAD:21243; match to protein family HMM PF00175.
   
  
 0.589
NMB0181
Putative outer membrane protein OmpH; Identified by similarity to EGAD:24192; match to protein family HMM PF03938; Belongs to the skp family.
  
     0.587
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.