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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB1964Conserved hypothetical protein; Identified by similarity to EGAD:28106; match to protein family HMM PF02470. (164 aa)    
Predicted Functional Partners:
NMB1965
Conserved hypothetical protein; Identified by similarity to EGAD:28097; match to protein family HMM PF02405; match to protein family HMM TIGR00056.
 
 0.999
NMB1966
ABC transporter, ATP-binding protein; Identified by similarity to EGAD:28098; match to protein family HMM PF00005.
 
 0.998
NMB1963
Conserved hypothetical protein; Identified by similarity to EGAD:163193; match to protein family HMM PF05494.
 
 0.995
NMB1962
Hypothetical protein; Identified by Glimmer2; putative.
  
 0.955
NMB1961
VacJ-related protein; Identified by similarity to EGAD:90986; match to protein family HMM PF04333.
 
  
 0.915
NMB0552
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.726
NMB1780
Putative hemolysin activation protein HecB; Identified by similarity to EGAD:131262; match to protein family HMM PF03865.
   
  
 0.723
NMB0548
AcrA/AcrE family protein; Identified by similarity to EGAD:91761; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  
 0.721
priA
Primosomal protein n`; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
      
 0.699
NMB1958
Putative thioredoxin; Identified by similarity to EGAD:109028.
  
  
 0.693
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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