| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NMB0769 | dinG | NMB0769 | NMB0287 | Putative DNA polymerase III, delta prime subunit; Identified by similarity to GP:145799; match to protein family HMM TIGR00678. | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.629 |
| NMB0769 | dnaN | NMB0769 | NMB1902 | Putative DNA polymerase III, delta prime subunit; Identified by similarity to GP:145799; match to protein family HMM TIGR00678. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.997 |
| NMB0769 | ligA-2 | NMB0769 | NMB2048 | Putative DNA polymerase III, delta prime subunit; Identified by similarity to GP:145799; match to protein family HMM TIGR00678. | DNA ligase; Identified by similarity to EGAD:28195; match to protein family HMM PF01068. | 0.725 |
| NMB0769 | mutL | NMB0769 | NMB1442 | Putative DNA polymerase III, delta prime subunit; Identified by similarity to GP:145799; match to protein family HMM TIGR00678. | Mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.409 |
| NMB0769 | polA | NMB0769 | NMB1982 | Putative DNA polymerase III, delta prime subunit; Identified by similarity to GP:145799; match to protein family HMM TIGR00678. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.891 |
| NMB0769 | recA | NMB0769 | NMB1445 | Putative DNA polymerase III, delta prime subunit; Identified by similarity to GP:145799; match to protein family HMM TIGR00678. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.542 |
| NMB0769 | recQ | NMB0769 | NMB0274 | Putative DNA polymerase III, delta prime subunit; Identified by similarity to GP:145799; match to protein family HMM TIGR00678. | ATP-dependent DNA helicase RecQ; Identified by similarity to GP:148221; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389. | 0.797 |
| dinG | NMB0769 | NMB0287 | NMB0769 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | Putative DNA polymerase III, delta prime subunit; Identified by similarity to GP:145799; match to protein family HMM TIGR00678. | 0.629 |
| dinG | dnaN | NMB0287 | NMB1902 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.910 |
| dinG | ligA-2 | NMB0287 | NMB2048 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA ligase; Identified by similarity to EGAD:28195; match to protein family HMM PF01068. | 0.427 |
| dinG | mutL | NMB0287 | NMB1442 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | Mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.439 |
| dinG | polA | NMB0287 | NMB1982 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.935 |
| dinG | recA | NMB0287 | NMB1445 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.708 |
| dinG | recQ | NMB0287 | NMB0274 | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | ATP-dependent DNA helicase RecQ; Identified by similarity to GP:148221; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389. | 0.567 |
| dnaN | NMB0769 | NMB1902 | NMB0769 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative DNA polymerase III, delta prime subunit; Identified by similarity to GP:145799; match to protein family HMM TIGR00678. | 0.997 |
| dnaN | dinG | NMB1902 | NMB0287 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Probable ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.910 |
| dnaN | ligA-2 | NMB1902 | NMB2048 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA ligase; Identified by similarity to EGAD:28195; match to protein family HMM PF01068. | 0.948 |
| dnaN | mutL | NMB1902 | NMB1442 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.976 |
| dnaN | mutS | NMB1902 | NMB2160 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.956 |
| dnaN | nrdA | NMB1902 | NMB1291 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.794 |
