STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB1983Hypothetical protein; Identified by Glimmer2; putative. (223 aa)    
Predicted Functional Partners:
NMB0129
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.774
slyX
Putative slyX protein; Identified by similarity to EGAD:19441; match to protein family HMM PF04102; Belongs to the SlyX family.
      
 0.774
NMB2094
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.773
pglA
Glycosyltransferase; Identified by similarity to GP:3599932; match to protein family HMM PF00534.
      
 0.430
lgtB
lacto-N-neotetraose biosynthesis glycosyl transferase LgtB; Adds the second galactose to the lacto-N-tetraose chain in lipooligosaccharide (LOS).
      
 0.430
NMB0194
Putative amino acid symporter; Identified by similarity to EGAD:28821; match to protein family HMM PF01235; match to protein family HMM TIGR00835.
   
    0.410
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.